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ERX11594382: Illumina NovaSeq 6000 paired end sequencing
1 ILLUMINA (Illumina NovaSeq 6000) run: 1.1M spots, 335.6M bases, 62.1Mb downloads

Design: Illumina sequencing of library SQPP-1217-I:H1, constructed from sample accession ERS13367982 for study accession ERP138651. This is part of an Illumina multiplexed sequencing run (46087_2). This submission includes reads tagged with the sequence CGTCGTCG.
Submitted by: Wellcome Sanger Institute
Study: Critical_Enterobacteriaceae_MDR_pathogen_acquisition__persistence_and_onward_transmission_in_an_inter_continental_context
PRJEB53835 • ERP138651 • All experiments • All runs
show Abstracthide Abstract
Colonisation of ESBL producing E. coli was screened from Finnish participants to the OEV123 vaccine trial in Benin during 2018-2019 and after return to Finland to establish dynamics of MDR-pathogen acquisition, persistence and onward transmission in an inter-continental context
Sample: MDRAPT12986374
SAMEA111270382 • ERS13367982 • All experiments • All runs
Organism: Escherichia coli
Library:
Name: SQPP-1217-I:H1
Instrument: Illumina NovaSeq 6000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: pWGS-384
Runs: 1 run, 1.1M spots, 335.6M bases, 62.1Mb
Run# of Spots# of BasesSizePublished
ERR121834921,111,296335.6M62.1Mb2024-07-20

ID:
33880815

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